mantispy.ds.agnp

mantispy.ds.agnp(cache_dir=None, **kwargs)

Silver nanoparticles, 180 wells at four sizes and three doses.

cpg0040-garcia-fossa-AgNP, the smallest dataset here at 300 kB. Metadata_NPSize_nm holds the particle size and Metadata_Concentration_mgml the dose.

Parameters:

• cache_dir (str | Path | None (default: None)) – Where to keep the download. Defaults to mantispy.settings.cache_dir.

• kwargs (Any) – Passed to mantispy.io.read_profiles().

Return type:

AnnData

Returns:

Wells by features, indexed by plate and well.

References

Garcia-Fossa et al. (2023), Interpreting image-based profiles using similarity clustering and single-cell visualization, Current Protocols.