mantispy.tl.grit#
- mantispy.tl.grit(adata, groupby='Metadata_Perturbation', reference='negcon', metric='pearson', use_rep=None, key_added='grit', copy=False)[source]#
Similarity of each replicate to its group, z-scored against its similarity to the controls.
For each profile, the similarities to its replicates are z-scored against its similarities to the control profiles and averaged. A perturbation’s grit is the mean over its replicates.